BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E01SP1|AL430393
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1569 1745 0.0
>3x_Contig1569
Length = 11625
Score = 1745 bits (877), Expect = 0.0
Identities = 888/895 (99%)
Strand = Plus / Plus
Query: 1 agatctctttctgaccccaaattggacaagatctccattcctcaaactaaaccagctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agatctctttctgaccccaaattggacaagatctccattcctcaaactaaaccagctctt 269
Query: 61 ggagaaaatgaaaagaacggcatcgattcaattaagaagaacttaaagagcaagagtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggagaaaatgaaaagaacggcatcgattcaattaagaagaacttaaagagcaagagtaaa 329
Query: 121 cgtaagaatggggaaaagaccaagaaaggttgcgtgattatgtgagcwaagtagaaatag 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 330 cgtaagaatggggaaaagaccaagaaaggttgcgtgattatgtgagctaagtagaaatag 389
Query: 181 ggaaactatctacaagcaactgcatgtttttctcagtttattcttagaacttatagacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggaaactatctacaagcaactgcatgtttttctcagtttattcttagaacttatagacct 449
Query: 241 cggccatctcaatgtataaatmattgtatttaaaatctggatatcagtaaaawagttcgg 300
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 450 cggccatctcaatgtataaatcattgtatttaaaatctggatatcagtaaaatagttcgg 509
Query: 301 aaaatgcatatacatcattattagtatatcttaatggcaaagaaatgacaatggttcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaaatgcatatacatcattattagtatatcttaatggcaaagaaatgacaatggttcatt 569
Query: 361 tattcttcaaagcataatatgttcttttcaatgtttaaagtcaactcaaggcaagaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tattcttcaaagcataatatgttcttttcaatgtttaaagtcaactcaaggcaagaaaag 629
Query: 421 attaaacttctagttaaacattgaaagaccaagaggtaaatcttactgtcatcaaggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 attaaacttctagttaaacattgaaagaccaagaggtaaatcttactgtcatcaaggcca 689
Query: 481 aatcacgtgatcgtaaatmttggcctttttttcatgtcttcaattttcagcaaaacatac 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aatcacgtgatcgtaaatcttggcctttttttcatgtcttcaattttcagcaaaacatac 749
Query: 541 tgcatttaccgtgaaatagatttgtaaagaaacagaaaatcgtccagtatatggggagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgcatttaccgtgaaatagatttgtaaagaaacagaaaatcgtccagtatatggggagcc 809
Query: 601 acagttaatacattgcaacaacatttacaccatatataaggggaagaagttcttactaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 acagttaatacattgcaacaacatttacaccatatataaggggaagaagttcttactaac 869
Query: 661 aaagttataccattgatagttctccaactttttaattgaacaactttcatcgattatagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 aaagttataccattgatagttctccaactttttaattgaacaactttcatcgattatagc 929
Query: 721 gacatattagacctgccaactcacgtagtcagataaacacacttcaagatgatgttccaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gacatattagacctgccaactcacgtagtcagataaacacacttcaagatgatgttccaa 989
Query: 781 cgtgctttgcttcaaacaaagagttctgtattgcgccasaaccctctcagaacttctgtt 840
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 990 cgtgctttgcttcaaacaaagagttctgtattgcgccagcaacctctcagaacttctgtt 1049
Query: 841 agattcatcagaactttcaagcaagaagaccaaccaagattgagaatcaactctg 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 agattcatcagaactttcaagcaagaagaccaaccaagattgagaatcaactctg 1104
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8242
Number of Sequences: 1807
Number of extensions: 8242
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)